experiment_acquisition#
Typed acquisition metadata extracted from a ZEN experiment.
Classes:
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AcquisitionDimensions–Acquisition axes known before pixel streaming starts.
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AcquisitionChannel–An active acquisition channel.
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ExperimentAcquisition–Small typed snapshot of the acquisition settings used by streaming.
Functions:
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query_experiment_acquisition–Export and parse a loaded experiment through the ZEN API.
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load_experiment_acquisition–Load an experiment by name, export it, and return its acquisition data.
dataclass
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AcquisitionDimensions(time_points: int, channels: int, z_planes: int, scenes: int, z_spacing: float = 1.0, tiles: int = 1, pixel_width: int | None = None, pixel_height: int | None = None)
Acquisition axes known before pixel streaming starts.
dataclass
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AcquisitionChannel(name: str | None, pixel_type: str | None)
An active acquisition channel.
dataclass
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ExperimentAcquisition(experiment_name: str | None, dimensions: AcquisitionDimensions, channels_info: tuple[AcquisitionChannel, ...], positions: tuple[dict[str, object], ...], split_scenes_in_separate_files: bool)
Small typed snapshot of the acquisition settings used by streaming.
Attributes:
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well_ids(tuple[str, ...]) –Unique sample-carrier well IDs in acquisition order.
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well_count(int) –Number of sample-carrier wells used for acquisition.
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position_count(int) –Number of active acquisition positions/scenes.
async
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query_experiment_acquisition(service: ExperimentServiceStub, experiment_id: str, experiment_name: str | None = None) -> ExperimentAcquisition
Export and parse a loaded experiment through the ZEN API.
async
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load_experiment_acquisition(service: ExperimentServiceStub, experiment_name: str) -> ExperimentAcquisition
Load an experiment by name, export it, and return its acquisition data.